SMTL ID : 7f3a.1

Arabidopsis thaliana GH1 beta-glucosidase AtBGlu42

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 10 residues within 4Å: Chain A: Q.36, H.138, N.183, E.184, N.316, E.389, W.438, E.445, W.446 Ligands: GOL.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.36, A:H.138, A:N.183, A:E.184, A:N.316, A:E.445 GOL.2: 7 residues within 4Å: Chain A: W.139, E.184, F.198, Y.318, W.361, E.445 Ligands: GOL.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.184, A:E.445 Water bridges: A:D.245 GOL.3: 5 residues within 4Å: Chain A: V.69, A.70, Y.450, Y.461, L.465 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.70 Water bridges: A:Y.450, A:Y.450 GOL.4: 2 residues within 4Å: Chain A: E.58, G.64 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horikoshi, S. et al., Substrate specificity of glycoside hydrolase family 1 beta-glucosidase AtBGlu42 from Arabidopsis thaliana and its molecular mechanism. Biosci.Biotechnol.Biochem. (2022)

Release Date

2022-03-16

Peptides

Beta-glucosidase 42: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-glucosidase 42