SMTL ID : 7f3g.1

Crystal structure of DCLK1 kinase domain in complex with ruxolitinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x RXT: (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile(Non-covalent)

RXT.1: 17 residues within 4Å: Chain A: I.29, G.30, D.31, A.35, V.37, A.50, K.52, V.82, M.98, E.99, L.100, V.101, E.148, N.149, L.151, G.165, D.166 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.35, A:V.37, A:V.37, A:L.151 Hydrogen bonds: A:E.99, A:V.101 RXT.2: 16 residues within 4Å: Chain B: I.29, G.30, D.31, V.37, A.50, K.52, V.82, M.98, E.99, L.100, V.101, E.148, N.149, L.151, G.165, D.166 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:V.37, B:V.37, B:L.151, B:L.151 Hydrogen bonds: B:E.99, B:V.101, B:D.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jang, D.M. et al., Structural Basis of Inhibition of DCLK1 by Ruxolitinib. Int J Mol Sci (2021)

Release Date

2021-08-18

Peptides

Isoform 4 of Serine/threonine-protein kinase DCLK1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Isoform 4 of Serine/threonine-protein kinase DCLK1