SMTL ID : 7f5c.1

Crystal structure of BPTF-BRD with ligand DC-BPi-07 bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x EUU: 6-[1-[3-(dimethylamino)propyl]indol-5-yl]-2-methylsulfonyl-N-propyl-pyrimidin-4-amine(Non-covalent)

EUU.1: 12 residues within 4Å: Chain A: W.26, P.27, F.28, V.32, D.33, D.36, A.37, P.38, C.79, Y.82, N.83, F.89 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.36, A:F.89, A:F.89 Hydrogen bonds: A:N.83, A:N.83 Water bridges: A:S.87 Salt bridges: A:D.33, A:D.36 pi-Stacking: A:W.26, A:W.26, A:F.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, T. et al., Discovery and Optimization of Small-Molecule Inhibitors for the BPTF Bromodomains Proteins. To Be Published

Release Date

2022-06-29

Peptides

Nucleosome-remodeling factor subunit BPTF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleosome-remodeling factor subunit BPTF

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