SMTL ID : 7f6y.1

Complex Structure of antibody BD-503 and RBD-E484K of COVID-19

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: F.20, G.21, F.24, N.25, L.50 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.24 Hydrogen bonds: A:N.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, H. et al., Structure-based analyses of neutralization antibodies interacting with naturally occurring SARS-CoV-2 RBD variants. Cell Res. (2021)

Release Date

2022-06-29

Peptides

Spike protein S1: A
Heavy Chain of BD-503: B
Light Chain of BD-503: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
H

C
L

Spike protein S1

Heavy Chain of BD-503

Light Chain of BD-503

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