SMTL ID : 7fau.2 (1 other biounit)

Structure Determination of the NB1B11-RBD Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain B: R.45, H.94 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.94 ZN.2: 2 residues within 4Å: Chain B: D.72, D.79 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.72, B:D.79, H2O.5, H2O.5, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, Z. et al., Structural basis of nanobodies neutralizing SARS-CoV-2 variants. Structure (2022)

Release Date

2022-06-01

Peptides

Spike protein S1: A
NB_1B11: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Spike protein S1

NB_1B11

Related Entries With Identical Sequence