SMTL ID : 7fbg.1

Kinetic and structural analysis by Peptidoglycan editing factor from Bacillus cereus ATCC 14579

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 4 residues within 4Å: Chain A: E.152, K.155, E.196, V.197 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.155, A:E.196 Water bridges: A:V.197

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.81, C.126, H.143 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.81, A:C.126, A:H.143 ZN.3: 4 residues within 4Å: Chain A: C.182, C.183, C.240, C.243 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.182, A:C.183, A:C.240, A:C.243

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 2 residues within 4Å: Chain A: Q.195, V.198 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:Q.195, A:V.198, H2O.1, H2O.3, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seok, J. et al., Kinetic and structural analysis by Peptidoglycan editing factor from Bacillus cereus ATCC 14579. to be published

Release Date

2022-07-13

Peptides

Purine nucleoside phosphorylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Purine nucleoside phosphorylase