SMTL ID : 7fdy.1

Structure of OmpF1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-trimer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.83, H.133 Chain C: E.72 4 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: A:H.83, A:H.133, C:E.72, H2O.1 ZN.2: 3 residues within 4Å: Chain A: E.72 Chain B: H.83, H.133 5 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.83, B:H.133, A:E.72, A:E.72, H2O.1 ZN.3: 3 residues within 4Å: Chain B: E.72 Chain C: H.83, H.133 4 PLIP interactions: 2 interactions with chain C, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: C:H.83, C:H.133, B:E.72, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jeong, W.J. et al., Design and directed evolution of noncanonical beta-stereoselective metalloglycosidases. Nat Commun (2022)

Release Date

2022-11-16

Peptides

Porin OmpF: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Porin OmpF