SMTL ID : 7feh.1

Crystal structure of human DDR1 in complex with CH5541127

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

1 x 3UI: N-[(5-chloranyl-2-ethylsulfonyl-phenyl)methyl]-3-piperazin-1-yl-5-(trifluoromethyloxy)benzamide(Non-covalent)

3UI.1: 19 residues within 4Å: Chain A: V.37, K.68, E.85, I.88, M.89, L.92, I.97, I.98, L.100, M.112, T.114, L.164, F.169, H.171, L.180, I.189, A.190, D.191, F.192 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:K.68, A:I.98, A:I.98, A:T.114, A:L.180, A:A.190, A:D.191, A:F.192 Hydrogen bonds: A:E.85, A:D.191 Water bridges: A:D.191

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 4 residues within 4Å: Chain A: F.252, G.253, Q.254, L.255 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:F.252, A:Q.254, A:Q.254, A:L.255 Water bridges: A:F.252, A:G.253 NO3.3: 4 residues within 4Å: Chain A: R.91, L.167, N.168, F.169 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.91, A:R.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuhn, B. et al., Novel potent and highly selective DDR1 inhibitors from integrated lead finding. Medicinal Chemistry Research (2023)

Release Date

2022-07-27

Peptides

Epithelial discoidin domain-containing receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epithelial discoidin domain-containing receptor 1