SMTL ID : 7fgz.1

Marine bacterial GH16 hydrolase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: D.29, N.31, G.69, D.253 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.29, A:G.69, A:D.253, A:D.253, H2O.2

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.2: 11 residues within 4Å: Chain A: P.54, N.114, W.116, E.125, D.127, E.130, E.225, H.227, D.228, W.229 Ligands: EPE.3 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.114, A:D.228, A:W.229 Water bridges: A:G.55 Salt bridges: A:E.125, A:E.125, A:D.127, A:E.130, A:E.225, A:E.225, A:H.227 EPE.3: 9 residues within 4Å: Chain A: Y.47, N.49, W.51, I.118, Q.122, E.125, R.151, F.154 Ligands: EPE.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.47, A:Q.122, A:R.151 Salt bridges: A:R.151 pi-Cation interactions: A:W.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, J., Marine bacterial GH16 hydrolase. To Be Published

Release Date

2022-08-03

Peptides

GH16 hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GH16 hydrolase