SMTL ID : 7fja.1

KpAckA (PduW) with AMPPNP, ethylene glycol complex structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 15 residues within 4Å: Chain A: H.179, H.207, G.209, N.210, G.211, S.281, D.282, Y.283, R.284, G.329, G.330, I.331, N.334, S.335 Ligands: EDO.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:H.207, A:N.210, A:N.210, A:G.211, A:G.211, A:Y.283, A:R.284, A:R.284, A:G.330, A:N.334 pi-Cation interactions: A:R.284 ANP.3: 14 residues within 4Å: Chain B: H.179, H.207, G.209, N.210, G.211, S.281, D.282, Y.283, R.284, G.329, G.330, I.331, N.334, S.335 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:H.179, B:N.210, B:G.211, B:G.211, B:Y.283, B:R.284, B:G.330, B:N.334 pi-Cation interactions: B:R.284

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: H.179, G.211, M.227, P.231, R.240 Ligands: ANP.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.211, A:R.240, A:R.240 Water bridges: A:H.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, W. et al., KpAckA (PduW) with AMPPNP, ethylene glycol complex structure. To Be Published

Release Date

2022-08-10

Peptides

Probable propionate kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Probable propionate kinase

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