SMTL ID : 7ftv.1

Crystal Structure of human cyclic GMP-AMP synthase in complex with 5-bromo-2-hydroxy-N-(quinolin-6-ylmethyl)benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.230, C.236, C.237, C.244 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.230, A:C.236, A:C.237, A:C.244

1 x YP3: 5-bromo-2-hydroxy-N-[(quinolin-6-yl)methyl]benzamide(Non-covalent)

YP3.2: 16 residues within 4Å: Chain A: A.87, Y.88, K.202, R.216, L.217, S.218, F.219, S.220, E.223, Y.276, K.279, F.283, N.322, F.324, F.328, L.330 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:A.87, A:E.223, A:F.324, A:F.328 Hydrogen bonds: A:Y.88, A:R.216, A:L.217, A:F.219, A:N.322 Water bridges: A:S.218, A:S.220 pi-Stacking: A:Y.276, A:Y.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Groebke-Zbinden, K. et al., Crystal Structure of a human cyclic GMP-AMP synthase complex. To be published

Release Date

2024-02-21

Peptides

Cyclic GMP-AMP synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclic GMP-AMP synthase

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