SMTL ID : 7fuf.1

Crystal Structure of human cyclic GMP-AMP synthase in complex with 5-benzyl-2-[[2-chloro-5-(1-methylpyrazol-3-yl)phenyl]methylamino]-4H-[1,2,4]triazolo[1,5-a]pyrimidin-7-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.230, C.236, C.237, C.244 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.230, A:C.236, A:C.237, A:C.244

1 x YP8: (8S)-5-benzyl-2-({[(5P)-2-chloro-5-(1-methyl-1H-pyrazol-3-yl)phenyl]methyl}amino)[1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one(Non-covalent)

YP8.2: 17 residues within 4Å: Chain A: A.87, R.216, L.217, S.218, F.219, S.220, E.223, Y.276, K.279, T.280, F.283, N.322, Y.323, F.324, I.325, F.328, L.330 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:E.223, A:K.279, A:F.283, A:F.283, A:Y.323, A:Y.323, A:Y.323, A:L.330 Hydrogen bonds: A:L.217, A:F.219, A:N.322 Water bridges: A:R.216, A:T.280, A:Y.323 pi-Stacking: A:Y.276, A:F.324, A:F.324, A:F.328 pi-Cation interactions: A:R.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Groebke-Zbinden, K. et al., Crystal Structure of a human cyclic GMP-AMP synthase complex. To be published

Release Date

2024-02-21

Peptides

Cyclic GMP-AMP synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclic GMP-AMP synthase

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