SMTL ID : 7fym.1

Crystal Structure of human FABP4 binding site mutated to that of FABP5 in complex with 5-(3-bromo-4-methylphenyl)-3,3-dimethyl-5-oxopentanoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.21 Å

Oligo State

monomer

Ligands

1 x W8N: 5-(3-bromo-4-methylphenyl)-3,3-dimethyl-5-oxopentanoic acid(Non-covalent)

W8N.1: 17 residues within 4Å: Chain A: F.20, Y.23, A.40, P.42, T.57, S.59, K.62, N.63, T.64, A.79, I.108, R.110, V.119, C.121, R.130, Y.132 Ligands: PG4.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.23, A:T.57, A:K.62, A:A.79, A:I.108 Hydrogen bonds: A:R.110, A:R.130, A:Y.132 Salt bridges: A:R.130

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 14 residues within 4Å: Chain A: F.20, Y.23, M.24, L.27, V.29, T.33, M.36, G.37, L.61, K.62, A.79, D.80, R.82 Ligands: W8N.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.82 Water bridges: A:Y.23

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 2 residues within 4Å: Chain A: N.49, V.52 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP4 binding site mutated to that of FABP5 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein, adipocyte: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, adipocyte

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