SMTL ID : 7h3v.2 (1 other biounit)

Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z1198177230 (A71EV2A-x0501)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.22 Å

Oligo State

monomer

Ligands

1 x K6U: (2M)-2-(2-methoxyphenyl)-1,3,4-oxadiazole

K6U.1: 12 residues within 4Å: Chain A: H.21, S.87, Y.89, S.105, E.106, P.107, C.110, V.124, S.125, T.126, G.127, G.128 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:P.107 Water bridges: A:S.87, A:S.87, A:G.127, A:G.127

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.56, C.58, C.116, H.118 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.56, A:C.58, A:C.116, A:H.118

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 2 residues within 4Å: Chain A: Y.64, H.71 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:Y.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lithgo, R.M. et al., Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease. To Be Published

Release Date

2024-04-24

Peptides

Protease 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protease 2A

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