SMTL ID : 7hok.1

PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with Z1272480091

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

hetero-1-1-mer

Ligands

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 6 residues within 4Å: Chain A: S.38, G.39, D.40 Chain B: H.42, D.66, N.143 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:D.40, B:D.66 DMS.2: 6 residues within 4Å: Chain A: R.30 Chain B: W.80, G.82, L.103, P.104, I.106 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.30 DMS.3: 3 residues within 4Å: Chain B: K.45, G.46, A.47 No protein-ligand interaction detected (PLIP)

1 x O2J: (2R)-2-(methoxymethyl)-4-(pyridin-2-yl)morpholine(Non-covalent)

O2J.4: 8 residues within 4Å: Chain B: Y.121, P.122, S.126, Y.141, G.142, V.146, G.150, Y.152 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:Y.141 pi-Stacking: B:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., PanDDA analysis group deposition. To Be Published

Release Date

2025-02-26

Peptides

Serine protease subunit NS2B: A
Serine protease NS3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B

Serine protease NS3

Related Entries With Identical Sequence