SMTL ID : 7ibg.1

PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 in complex with fragment X5449 (well G01) from the KIT library

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

1 x 01: methyl (1S)-2-oxocyclopentane-1-carboxylate

01.1: 5 residues within 4Å: Chain A: V.5, R.34, L.37, K.38, K.116 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.5, A:K.38, A:K.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lennartz, F. et al., Crystallographic fragment screening against SARS-CoV-2 nonstructural protein 1 using the F2X-Entry Screen and a newly developed fragment library. Acta Crystallogr D Struct Biol (2025)

Release Date

2025-10-22

Peptides

Host translation inhibitor nsp1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Host translation inhibitor nsp1

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