- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.08 Å
- Oligo State
- homo-24-mer
- Ligands
- 24 x V9Y: N~2~,N~5~-dihydroxyfuran-2,5-dicarboxamide(Non-covalent)
- 72 x NI: NICKEL (II) ION(Non-covalent)
NI.2: 4 residues within 4Å:- Chain A: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.3: 8 residues within 4Å:- Chain A: H.122
- Chain E: H.122
- Chain I: H.122
- Ligands: V9Y.1, V9Y.21, NI.23, V9Y.41, NI.43
Ligand excluded by PLIPNI.4: 7 residues within 4Å:- Chain A: H.173
- Chain C: H.173
- Chain U: H.173
- Chain W: H.173
- Ligands: NI.14, NI.104, NI.114
Ligand excluded by PLIPNI.7: 4 residues within 4Å:- Chain B: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.8: 8 residues within 4Å:- Chain B: H.122
- Chain G: H.122
- Chain L: H.122
- Ligands: V9Y.6, V9Y.31, NI.33, V9Y.56, NI.58
Ligand excluded by PLIPNI.9: 7 residues within 4Å:- Chain B: H.173
- Chain D: H.173
- Chain V: H.173
- Chain X: H.173
- Ligands: NI.19, NI.109, NI.119
Ligand excluded by PLIPNI.12: 4 residues within 4Å:- Chain C: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.13: 8 residues within 4Å:- Chain C: H.122
- Chain H: H.122
- Chain J: H.122
- Ligands: V9Y.11, V9Y.36, NI.38, V9Y.46, NI.48
Ligand excluded by PLIPNI.14: 7 residues within 4Å:- Chain A: H.173
- Chain C: H.173
- Chain U: H.173
- Chain W: H.173
- Ligands: NI.4, NI.104, NI.114
Ligand excluded by PLIPNI.17: 4 residues within 4Å:- Chain D: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.18: 8 residues within 4Å:- Chain D: H.122
- Chain F: H.122
- Chain K: H.122
- Ligands: V9Y.16, V9Y.26, NI.28, V9Y.51, NI.53
Ligand excluded by PLIPNI.19: 7 residues within 4Å:- Chain B: H.173
- Chain D: H.173
- Chain V: H.173
- Chain X: H.173
- Ligands: NI.9, NI.109, NI.119
Ligand excluded by PLIPNI.22: 4 residues within 4Å:- Chain E: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.23: 8 residues within 4Å:- Chain A: H.122
- Chain E: H.122
- Chain I: H.122
- Ligands: V9Y.1, NI.3, V9Y.21, V9Y.41, NI.43
Ligand excluded by PLIPNI.24: 7 residues within 4Å:- Chain E: H.173
- Chain G: H.173
- Chain R: H.173
- Chain T: H.173
- Ligands: NI.34, NI.89, NI.99
Ligand excluded by PLIPNI.27: 4 residues within 4Å:- Chain F: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.28: 8 residues within 4Å:- Chain D: H.122
- Chain F: H.122
- Chain K: H.122
- Ligands: V9Y.16, NI.18, V9Y.26, V9Y.51, NI.53
Ligand excluded by PLIPNI.29: 7 residues within 4Å:- Chain F: H.173
- Chain H: H.173
- Chain Q: H.173
- Chain S: H.173
- Ligands: NI.39, NI.84, NI.94
Ligand excluded by PLIPNI.32: 4 residues within 4Å:- Chain G: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.33: 8 residues within 4Å:- Chain B: H.122
- Chain G: H.122
- Chain L: H.122
- Ligands: V9Y.6, NI.8, V9Y.31, V9Y.56, NI.58
Ligand excluded by PLIPNI.34: 7 residues within 4Å:- Chain E: H.173
- Chain G: H.173
- Chain R: H.173
- Chain T: H.173
- Ligands: NI.24, NI.89, NI.99
Ligand excluded by PLIPNI.37: 4 residues within 4Å:- Chain H: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.38: 8 residues within 4Å:- Chain C: H.122
- Chain H: H.122
- Chain J: H.122
- Ligands: V9Y.11, NI.13, V9Y.36, V9Y.46, NI.48
Ligand excluded by PLIPNI.39: 7 residues within 4Å:- Chain F: H.173
- Chain H: H.173
- Chain Q: H.173
- Chain S: H.173
- Ligands: NI.29, NI.84, NI.94
Ligand excluded by PLIPNI.42: 4 residues within 4Å:- Chain I: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.43: 8 residues within 4Å:- Chain A: H.122
- Chain E: H.122
- Chain I: H.122
- Ligands: V9Y.1, NI.3, V9Y.21, NI.23, V9Y.41
Ligand excluded by PLIPNI.44: 7 residues within 4Å:- Chain I: H.173
- Chain K: H.173
- Chain M: H.173
- Chain O: H.173
- Ligands: NI.54, NI.64, NI.74
Ligand excluded by PLIPNI.47: 4 residues within 4Å:- Chain J: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.48: 8 residues within 4Å:- Chain C: H.122
- Chain H: H.122
- Chain J: H.122
- Ligands: V9Y.11, NI.13, V9Y.36, NI.38, V9Y.46
Ligand excluded by PLIPNI.49: 7 residues within 4Å:- Chain J: H.173
- Chain L: H.173
- Chain N: H.173
- Chain P: H.173
- Ligands: NI.59, NI.69, NI.79
Ligand excluded by PLIPNI.52: 4 residues within 4Å:- Chain K: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.53: 8 residues within 4Å:- Chain D: H.122
- Chain F: H.122
- Chain K: H.122
- Ligands: V9Y.16, NI.18, V9Y.26, NI.28, V9Y.51
Ligand excluded by PLIPNI.54: 7 residues within 4Å:- Chain I: H.173
- Chain K: H.173
- Chain M: H.173
- Chain O: H.173
- Ligands: NI.44, NI.64, NI.74
Ligand excluded by PLIPNI.57: 4 residues within 4Å:- Chain L: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.58: 8 residues within 4Å:- Chain B: H.122
- Chain G: H.122
- Chain L: H.122
- Ligands: V9Y.6, NI.8, V9Y.31, NI.33, V9Y.56
Ligand excluded by PLIPNI.59: 7 residues within 4Å:- Chain J: H.173
- Chain L: H.173
- Chain N: H.173
- Chain P: H.173
- Ligands: NI.49, NI.69, NI.79
Ligand excluded by PLIPNI.62: 4 residues within 4Å:- Chain M: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.63: 8 residues within 4Å:- Chain M: H.122
- Chain Q: H.122
- Chain U: H.122
- Ligands: V9Y.61, V9Y.81, NI.83, V9Y.101, NI.103
Ligand excluded by PLIPNI.64: 7 residues within 4Å:- Chain I: H.173
- Chain K: H.173
- Chain M: H.173
- Chain O: H.173
- Ligands: NI.44, NI.54, NI.74
Ligand excluded by PLIPNI.67: 4 residues within 4Å:- Chain N: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.68: 8 residues within 4Å:- Chain N: H.122
- Chain S: H.122
- Chain X: H.122
- Ligands: V9Y.66, V9Y.91, NI.93, V9Y.116, NI.118
Ligand excluded by PLIPNI.69: 7 residues within 4Å:- Chain J: H.173
- Chain L: H.173
- Chain N: H.173
- Chain P: H.173
- Ligands: NI.49, NI.59, NI.79
Ligand excluded by PLIPNI.72: 4 residues within 4Å:- Chain O: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.73: 8 residues within 4Å:- Chain O: H.122
- Chain T: H.122
- Chain V: H.122
- Ligands: V9Y.71, V9Y.96, NI.98, V9Y.106, NI.108
Ligand excluded by PLIPNI.74: 7 residues within 4Å:- Chain I: H.173
- Chain K: H.173
- Chain M: H.173
- Chain O: H.173
- Ligands: NI.44, NI.54, NI.64
Ligand excluded by PLIPNI.77: 4 residues within 4Å:- Chain P: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.78: 8 residues within 4Å:- Chain P: H.122
- Chain R: H.122
- Chain W: H.122
- Ligands: V9Y.76, V9Y.86, NI.88, V9Y.111, NI.113
Ligand excluded by PLIPNI.79: 7 residues within 4Å:- Chain J: H.173
- Chain L: H.173
- Chain N: H.173
- Chain P: H.173
- Ligands: NI.49, NI.59, NI.69
Ligand excluded by PLIPNI.82: 4 residues within 4Å:- Chain Q: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.83: 8 residues within 4Å:- Chain M: H.122
- Chain Q: H.122
- Chain U: H.122
- Ligands: V9Y.61, NI.63, V9Y.81, V9Y.101, NI.103
Ligand excluded by PLIPNI.84: 7 residues within 4Å:- Chain F: H.173
- Chain H: H.173
- Chain Q: H.173
- Chain S: H.173
- Ligands: NI.29, NI.39, NI.94
Ligand excluded by PLIPNI.87: 4 residues within 4Å:- Chain R: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.88: 8 residues within 4Å:- Chain P: H.122
- Chain R: H.122
- Chain W: H.122
- Ligands: V9Y.76, NI.78, V9Y.86, V9Y.111, NI.113
Ligand excluded by PLIPNI.89: 7 residues within 4Å:- Chain E: H.173
- Chain G: H.173
- Chain R: H.173
- Chain T: H.173
- Ligands: NI.24, NI.34, NI.99
Ligand excluded by PLIPNI.92: 4 residues within 4Å:- Chain S: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.93: 8 residues within 4Å:- Chain N: H.122
- Chain S: H.122
- Chain X: H.122
- Ligands: V9Y.66, NI.68, V9Y.91, V9Y.116, NI.118
Ligand excluded by PLIPNI.94: 7 residues within 4Å:- Chain F: H.173
- Chain H: H.173
- Chain Q: H.173
- Chain S: H.173
- Ligands: NI.29, NI.39, NI.84
Ligand excluded by PLIPNI.97: 4 residues within 4Å:- Chain T: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.98: 8 residues within 4Å:- Chain O: H.122
- Chain T: H.122
- Chain V: H.122
- Ligands: V9Y.71, NI.73, V9Y.96, V9Y.106, NI.108
Ligand excluded by PLIPNI.99: 7 residues within 4Å:- Chain E: H.173
- Chain G: H.173
- Chain R: H.173
- Chain T: H.173
- Ligands: NI.24, NI.34, NI.89
Ligand excluded by PLIPNI.102: 4 residues within 4Å:- Chain U: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.103: 8 residues within 4Å:- Chain M: H.122
- Chain Q: H.122
- Chain U: H.122
- Ligands: V9Y.61, NI.63, V9Y.81, NI.83, V9Y.101
Ligand excluded by PLIPNI.104: 7 residues within 4Å:- Chain A: H.173
- Chain C: H.173
- Chain U: H.173
- Chain W: H.173
- Ligands: NI.4, NI.14, NI.114
Ligand excluded by PLIPNI.107: 4 residues within 4Å:- Chain V: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.108: 8 residues within 4Å:- Chain O: H.122
- Chain T: H.122
- Chain V: H.122
- Ligands: V9Y.71, NI.73, V9Y.96, NI.98, V9Y.106
Ligand excluded by PLIPNI.109: 7 residues within 4Å:- Chain B: H.173
- Chain D: H.173
- Chain V: H.173
- Chain X: H.173
- Ligands: NI.9, NI.19, NI.119
Ligand excluded by PLIPNI.112: 4 residues within 4Å:- Chain W: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.113: 8 residues within 4Å:- Chain P: H.122
- Chain R: H.122
- Chain W: H.122
- Ligands: V9Y.76, NI.78, V9Y.86, NI.88, V9Y.111
Ligand excluded by PLIPNI.114: 7 residues within 4Å:- Chain A: H.173
- Chain C: H.173
- Chain U: H.173
- Chain W: H.173
- Ligands: NI.4, NI.14, NI.104
Ligand excluded by PLIPNI.117: 4 residues within 4Å:- Chain X: E.27, E.62, H.65, Q.141
Ligand excluded by PLIPNI.118: 8 residues within 4Å:- Chain N: H.122
- Chain S: H.122
- Chain X: H.122
- Ligands: V9Y.66, NI.68, V9Y.91, NI.93, V9Y.116
Ligand excluded by PLIPNI.119: 7 residues within 4Å:- Chain B: H.173
- Chain D: H.173
- Chain V: H.173
- Chain X: H.173
- Ligands: NI.9, NI.19, NI.109
Ligand excluded by PLIP- 24 x NA: SODIUM ION(Non-functional Binders)
NA.5: 8 residues within 4Å:- Chain A: D.131, E.134
- Chain E: D.131, E.134
- Chain I: D.131, E.134
- Ligands: NA.25, NA.45
Ligand excluded by PLIPNA.10: 8 residues within 4Å:- Chain B: D.131, E.134
- Chain G: D.131, E.134
- Chain L: D.131, E.134
- Ligands: NA.35, NA.60
Ligand excluded by PLIPNA.15: 8 residues within 4Å:- Chain C: D.131, E.134
- Chain H: D.131, E.134
- Chain J: D.131, E.134
- Ligands: NA.40, NA.50
Ligand excluded by PLIPNA.20: 8 residues within 4Å:- Chain D: D.131, E.134
- Chain F: D.131, E.134
- Chain K: D.131, E.134
- Ligands: NA.30, NA.55
Ligand excluded by PLIPNA.25: 8 residues within 4Å:- Chain A: D.131, E.134
- Chain E: D.131, E.134
- Chain I: D.131, E.134
- Ligands: NA.5, NA.45
Ligand excluded by PLIPNA.30: 8 residues within 4Å:- Chain D: D.131, E.134
- Chain F: D.131, E.134
- Chain K: D.131, E.134
- Ligands: NA.20, NA.55
Ligand excluded by PLIPNA.35: 8 residues within 4Å:- Chain B: D.131, E.134
- Chain G: D.131, E.134
- Chain L: D.131, E.134
- Ligands: NA.10, NA.60
Ligand excluded by PLIPNA.40: 8 residues within 4Å:- Chain C: D.131, E.134
- Chain H: D.131, E.134
- Chain J: D.131, E.134
- Ligands: NA.15, NA.50
Ligand excluded by PLIPNA.45: 8 residues within 4Å:- Chain A: D.131, E.134
- Chain E: D.131, E.134
- Chain I: D.131, E.134
- Ligands: NA.5, NA.25
Ligand excluded by PLIPNA.50: 8 residues within 4Å:- Chain C: D.131, E.134
- Chain H: D.131, E.134
- Chain J: D.131, E.134
- Ligands: NA.15, NA.40
Ligand excluded by PLIPNA.55: 8 residues within 4Å:- Chain D: D.131, E.134
- Chain F: D.131, E.134
- Chain K: D.131, E.134
- Ligands: NA.20, NA.30
Ligand excluded by PLIPNA.60: 8 residues within 4Å:- Chain B: D.131, E.134
- Chain G: D.131, E.134
- Chain L: D.131, E.134
- Ligands: NA.10, NA.35
Ligand excluded by PLIPNA.65: 8 residues within 4Å:- Chain M: D.131, E.134
- Chain Q: D.131, E.134
- Chain U: D.131, E.134
- Ligands: NA.85, NA.105
Ligand excluded by PLIPNA.70: 8 residues within 4Å:- Chain N: D.131, E.134
- Chain S: D.131, E.134
- Chain X: D.131, E.134
- Ligands: NA.95, NA.120
Ligand excluded by PLIPNA.75: 8 residues within 4Å:- Chain O: D.131, E.134
- Chain T: D.131, E.134
- Chain V: D.131, E.134
- Ligands: NA.100, NA.110
Ligand excluded by PLIPNA.80: 8 residues within 4Å:- Chain P: D.131, E.134
- Chain R: D.131, E.134
- Chain W: D.131, E.134
- Ligands: NA.90, NA.115
Ligand excluded by PLIPNA.85: 8 residues within 4Å:- Chain M: D.131, E.134
- Chain Q: D.131, E.134
- Chain U: D.131, E.134
- Ligands: NA.65, NA.105
Ligand excluded by PLIPNA.90: 8 residues within 4Å:- Chain P: D.131, E.134
- Chain R: D.131, E.134
- Chain W: D.131, E.134
- Ligands: NA.80, NA.115
Ligand excluded by PLIPNA.95: 8 residues within 4Å:- Chain N: D.131, E.134
- Chain S: D.131, E.134
- Chain X: D.131, E.134
- Ligands: NA.70, NA.120
Ligand excluded by PLIPNA.100: 8 residues within 4Å:- Chain O: D.131, E.134
- Chain T: D.131, E.134
- Chain V: D.131, E.134
- Ligands: NA.75, NA.110
Ligand excluded by PLIPNA.105: 8 residues within 4Å:- Chain M: D.131, E.134
- Chain Q: D.131, E.134
- Chain U: D.131, E.134
- Ligands: NA.65, NA.85
Ligand excluded by PLIPNA.110: 8 residues within 4Å:- Chain O: D.131, E.134
- Chain T: D.131, E.134
- Chain V: D.131, E.134
- Ligands: NA.75, NA.100
Ligand excluded by PLIPNA.115: 8 residues within 4Å:- Chain P: D.131, E.134
- Chain R: D.131, E.134
- Chain W: D.131, E.134
- Ligands: NA.80, NA.90
Ligand excluded by PLIPNA.120: 8 residues within 4Å:- Chain N: D.131, E.134
- Chain S: D.131, E.134
- Chain X: D.131, E.134
- Ligands: NA.70, NA.95
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bailey, J.B. et al., Tunable and Cooperative Thermomechanical Properties of Protein-Metal-Organic Frameworks. J.Am.Chem.Soc. (2020)
- Release Date
- 2020-10-14
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.08 Å
- Oligo State
- homo-24-mer
- Ligands
- 24 x V9Y: N~2~,N~5~-dihydroxyfuran-2,5-dicarboxamide(Non-covalent)
- 72 x NI: NICKEL (II) ION(Non-covalent)
- 24 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bailey, J.B. et al., Tunable and Cooperative Thermomechanical Properties of Protein-Metal-Organic Frameworks. J.Am.Chem.Soc. (2020)
- Release Date
- 2020-10-14
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A