SMTL ID : 7jhx.2 (1 other biounit)

Crystal structure of hEPG5 LIR/GABARAPL1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Y.10, H.14, Y.18, R.52, K.53 Chain B: S.7 8 PLIP interactions: 6 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:Y.18, A:Y.18, B:S.7 Water bridges: A:D.13, B:S.7 Salt bridges: A:H.14, A:R.52, A:K.53 SO4.2: 2 residues within 4Å: Chain A: D.59, T.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nam, S.E. et al., Insights on autophagosome-lysosome tethering from structural and biochemical characterization of human autophagy factor EPG5. Commun Biol (2021)

Release Date

2021-03-17

Peptides

Gamma-aminobutyric acid receptor-associated protein-like 1: A
Ectopic P granules protein 5 homolog: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Gamma-aminobutyric acid receptor-associated protein-like 1

Ectopic P granules protein 5 homolog

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