SMTL ID : 7jk7.1

Crystal structure of Importin alpha 2 in complex with LSD1 NLS S111E mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

hetero-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain B: Q.310, V.313, E.350, Q.351, Y.354 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.310, B:Q.310 GOL.2: 3 residues within 4Å: Chain B: G.11, W.15, D.19 No protein-ligand interaction detected (PLIP) GOL.3: 9 residues within 4Å: Chain B: N.202, P.204, L.207, K.239, L.240, A.243, T.244, E.245, I.248 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.239, B:E.245 GOL.4: 9 residues within 4Å: Chain B: V.353, V.356, H.357, A.390, L.393, E.395, K.398, L.399, M.402 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.395

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tu, W.J. et al., Targeting Nuclear LSD1 to Reprogram Cancer Cells and Reinvigorate Exhausted T Cells via a Novel LSD1-EOMES Switch. Front Immunol (2020)

Release Date

2020-08-05

Peptides

Lysine-specific histone demethylase 1A: A
Importin subunit alpha-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lysine-specific histone demethylase 1A

Importin subunit alpha-1

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