SMTL ID : 7jky.1

Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with YF3-126

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.16 Å

Oligo State

monomer

Ligands

1 x YF6: N-(1-[1,1-di(pyridin-2-yl)ethyl]-6-{1-methyl-6-oxo-5-[(piperidin-4-yl)amino]-1,6-dihydropyridin-3-yl}-1H-indol-4-yl)ethanesulfonamide(Non-covalent)

YF6.1: 13 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, P.45, V.46, D.47, K.50, L.51, N.99, D.104, I.105, M.108 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.41, A:Q.44, A:L.51, A:L.51, A:I.105, A:I.105 Hydrogen bonds: A:D.47, A:K.50, A:N.99, A:N.99 Water bridges: A:D.47, A:K.50 pi-Stacking: A:W.40

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Novel Pyrrolopyridone Bromodomain and Extra-Terminal Motif (BET) Inhibitors Effective in Endocrine-Resistant ER+ Breast Cancer with Acquired Resistance to Fulvestrant and Palbociclib. J.Med.Chem. (2020)

Release Date

2021-08-25

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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