SMTL ID : 7jls.1

RV3666c bound to tripeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

monomer

Ligands

1 x SER- VAL- ALA: Peptide SER-VAL-ALA(Non-covalent)

SER-VAL-ALA.1: 10 residues within 4Å: Chain A: N.48, D.49, S.50, F.418, R.422, R.435, G.437, W.438, R.439, D.441 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:D.49, A:F.418, A:W.438 Hydrogen bonds: A:N.48, A:S.50, A:R.435, A:R.435, A:G.437, A:R.439, A:D.441 Water bridges: A:S.50, A:S.50, A:G.437

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fernando, D.M. et al., Biophysical analysis of the Mycobacteria tuberculosis peptide binding protein DppA reveals a stringent peptide binding pocket. Tuberculosis (Edinb) (2021)

Release Date

2021-06-09

Peptides

Probable periplasmic dipeptide-binding lipoprotein DppA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable periplasmic dipeptide-binding lipoprotein DppA