SMTL ID : 7jme.1

Structure of the SARS-CoV-2 NSP3 Macro X domain in complex with cyclic AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x CMP: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE(Non-covalent)

CMP.1: 17 residues within 4Å: Chain A: A.37, A.38, N.39, K.43, H.44, G.45, G.46, G.47, V.48, A.49, L.125, L.126, S.127, A.128, G.129, I.130, F.131 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.45, A:G.46, A:V.48, A:A.49, A:S.127, A:A.128, A:G.129, A:F.131 Water bridges: A:N.39, A:N.39, A:G.45, A:I.130, A:I.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Virdi, R.S. et al., Discovery of Drug-Like Ligands for the Mac1 Domain of SARS-CoV-2 Nsp3. Slas Discov (2020)

Release Date

2020-09-02

Peptides

Non-structural protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-structural protein 3

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