SMTL ID : 7jtg.1

Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM11-43

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain C: T.68, N.123, T.125, F.127, K.129 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:F.127

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: T.28 Chain C: N.12, W.96 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tzarum, N. et al., HCV Env immunization elicits a rapid VH1-69-like broadly neutralizing antibody response in rhesus macaques. Immunity (2021)

Release Date

2021-03-10

Peptides

RM11-43 Fab heavy chain: A
RM11-43 Fab light chain: B
Envelope glycoprotein E2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

RM11-43 Fab heavy chain

RM11-43 Fab light chain

Envelope glycoprotein E2

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