SMTL ID : 7jvc.1

SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-mer
Ligands
12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
33 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Piccoli, L. et al., Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology. Cell (2020)
Release Date
2020-10-14
Peptides
Spike glycoprotein: ADG
S2A4 Fab heavy chain: BEH
S2A4 Fab light chain: CFI
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
D
B
G
E
B
H
E
C
H
F
C
L
F
D
I
G

Spike glycoprotein

Toggle Identical (ADG)

S2A4 Fab heavy chain

Toggle Identical (BEH)

S2A4 Fab light chain

Toggle Identical (CFI)

Related Entries With Identical Sequence

6vxx.1 | 6wps.1 | 6wpt.1 | 7jv2.1 | 7jv4.1 | 7jv6.1 | 7jva.1 | 7jw0.1 | 7jxd.1 | 7jxd.2 | 7k43.1