SMTL ID : 7jvs.1

Crystal Structure of an Essential Ribosomal Processing Protease Prp from S. aureus in complex with a Substrate Peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-2-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: L.51, T.52, E.78 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:L.51, A:E.78 CA.2: 3 residues within 4Å: Chain C: T.7, V.8, K.106 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:V.8, H2O.1

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 3 residues within 4Å: Chain C: I.18, H.66, H.68 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:H.66, C:H.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, H.T. et al., Crystal Structure of an Essential Ribosomal Processing Protease Prp from S. aureus in complex with a Substrate Peptide. To be published

Release Date

2021-09-01

Peptides

Ribosomal-processing cysteine protease Prp: AC
L27 ribosomal peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
D

B
C

Ribosomal-processing cysteine protease Prp

L27 ribosomal peptide