- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-2-mer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 14 x POV: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(Non-covalent)(Non-functional Binders)
POV.2: 8 residues within 4Å:- Chain B: L.83, F.84, Y.86, L.87, F.90, Y.93
- Chain C: M.40
- Ligands: POV.4
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:L.83, B:Y.93
POV.3: 6 residues within 4Å:- Chain B: Y.122
- Chain D: N.13, G.69, P.71, H.85
- Ligands: POV.8
1 PLIP interactions:1 interactions with chain D- Hydrophobic interactions: D:P.71
POV.4: 1 residues within 4Å:- Ligands: POV.2
No protein-ligand interaction detected (PLIP)POV.5: 3 residues within 4Å:- Chain C: T.35, S.39, M.40
1 PLIP interactions:1 interactions with chain C- Hydrophobic interactions: C:T.35
POV.6: 1 residues within 4Å:- Chain C: N.38
No protein-ligand interaction detected (PLIP)POV.7: 5 residues within 4Å:- Chain D: I.30, F.101, I.104, T.105, L.109
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:I.30, D:F.101, D:I.104, D:L.109
POV.8: 6 residues within 4Å:- Chain B: V.76
- Chain D: I.22, S.25, Y.26, A.29
- Ligands: POV.3
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain B- Hydrophobic interactions: D:I.22, D:Y.26, D:A.29, B:V.76
POV.9: 1 residues within 4Å:- Ligands: POV.14
No protein-ligand interaction detected (PLIP)POV.10: 3 residues within 4Å:- Chain E: T.35, S.39, M.40
1 PLIP interactions:1 interactions with chain E- Hydrophobic interactions: E:T.35
POV.11: 1 residues within 4Å:- Chain E: N.38
No protein-ligand interaction detected (PLIP)POV.12: 5 residues within 4Å:- Chain F: I.30, F.101, I.104, T.105, L.109
4 PLIP interactions:4 interactions with chain F- Hydrophobic interactions: F:I.30, F:F.101, F:I.104, F:L.109
POV.13: 7 residues within 4Å:- Chain F: I.22, S.25, Y.26, A.29
- Chain H: Y.75, V.76
- Ligands: POV.15
4 PLIP interactions:1 interactions with chain H, 3 interactions with chain F- Hydrophobic interactions: H:V.76, F:I.22, F:Y.26, F:A.29
POV.14: 9 residues within 4Å:- Chain E: M.40
- Chain F: I.62, V.67
- Chain H: L.83, F.84, Y.86, L.87, F.90
- Ligands: POV.9
3 PLIP interactions:2 interactions with chain F, 1 interactions with chain H- Hydrophobic interactions: F:I.62, F:V.67, H:L.83
POV.15: 6 residues within 4Å:- Chain F: N.13, G.69, P.71, H.85
- Chain H: Y.122
- Ligands: POV.13
1 PLIP interactions:1 interactions with chain F- Hydrophobic interactions: F:P.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, Y. et al., Structural insights into the regulation of human serine palmitoyltransferase complexes. Nat.Struct.Mol.Biol. (2021)
- Release Date
- 2021-02-24
- Peptides
- Serine palmitoyltransferase 1: AG
Serine palmitoyltransferase 2: BH
Serine palmitoyltransferase small subunit A: CE
ORM1-like protein 3: DF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AG
EB
BH
FC
CE
GD
DF
H - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-2-mer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 14 x POV: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, Y. et al., Structural insights into the regulation of human serine palmitoyltransferase complexes. Nat.Struct.Mol.Biol. (2021)
- Release Date
- 2021-02-24
- Peptides
- Serine palmitoyltransferase 1: AG
Serine palmitoyltransferase 2: BH
Serine palmitoyltransferase small subunit A: CE
ORM1-like protein 3: DF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AG
EB
BH
FC
CE
GD
DF
H - Membrane
-
We predict this structure to be a membrane protein.