- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 8 x ZN: ZINC ION(Non-covalent)
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.3: 34 residues within 4Å:- Chain A: C.43, H.44, T.45, H.48, W.54, C.153, T.157, S.176, G.177, A.179, G.180, G.181, L.182, I.200, D.201, G.202, K.206, F.221, V.245, S.246, V.247, S.248, A.251, V.268, G.269, M.270, S.293, Y.294, V.295, M.332, R.340
- Chain D: V.284
- Ligands: ZN.1, ETF.4
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:T.157, A:L.182, A:V.268
- Hydrogen bonds: A:H.44, A:H.48, A:G.181, A:L.182, A:K.206, A:V.247, A:S.248, A:S.248, A:V.268, A:M.270
- Salt bridges: A:H.44, A:R.340
- pi-Stacking: A:F.221
NAD.7: 34 residues within 4Å:- Chain B: C.43, H.44, T.45, H.48, W.54, C.153, T.157, S.176, G.177, A.179, G.180, G.181, L.182, I.200, D.201, G.202, K.206, F.221, V.245, S.246, V.247, S.248, A.251, V.268, G.269, M.270, S.293, Y.294, V.295, M.332, R.340
- Chain C: V.284
- Ligands: ZN.5, ETF.8
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:T.157, B:L.182, B:V.268
- Hydrogen bonds: B:H.44, B:H.48, B:G.181, B:L.182, B:K.206, B:V.247, B:S.248, B:S.248, B:V.268, B:M.270
- Salt bridges: B:H.44, B:R.340
- pi-Stacking: B:F.221
NAD.11: 34 residues within 4Å:- Chain B: V.284
- Chain C: C.43, H.44, T.45, H.48, W.54, C.153, T.157, S.176, G.177, A.179, G.180, G.181, L.182, I.200, D.201, G.202, K.206, F.221, V.245, S.246, V.247, S.248, A.251, V.268, G.269, M.270, S.293, Y.294, V.295, M.332, R.340
- Ligands: ZN.9, ETF.12
17 PLIP interactions:17 interactions with chain C- Hydrophobic interactions: C:T.157, C:L.182, C:V.268
- Hydrogen bonds: C:H.44, C:T.45, C:H.48, C:G.181, C:L.182, C:K.206, C:V.247, C:S.248, C:S.248, C:V.268, C:M.270
- Salt bridges: C:H.44, C:R.340
- pi-Stacking: C:F.221
NAD.15: 34 residues within 4Å:- Chain A: V.284
- Chain D: C.43, H.44, T.45, H.48, W.54, C.153, T.157, S.176, G.177, A.179, G.180, G.181, L.182, I.200, D.201, G.202, K.206, F.221, V.245, S.246, V.247, S.248, A.251, V.268, G.269, M.270, S.293, Y.294, V.295, M.332, R.340
- Ligands: ZN.13, ETF.16
17 PLIP interactions:17 interactions with chain D- Hydrophobic interactions: D:T.157, D:L.182, D:V.268
- Hydrogen bonds: D:H.44, D:T.45, D:H.48, D:G.181, D:L.182, D:K.206, D:V.247, D:S.248, D:S.248, D:V.268, D:M.270
- Salt bridges: D:H.44, D:R.340
- pi-Stacking: D:F.221
- 4 x ETF: TRIFLUOROETHANOL(Non-covalent)
ETF.4: 11 residues within 4Å:- Chain A: C.43, T.45, W.54, H.66, W.92, C.153, M.270, Y.294, V.295
- Ligands: ZN.1, NAD.3
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.45
ETF.8: 11 residues within 4Å:- Chain B: C.43, T.45, W.54, H.66, W.92, C.153, M.270, Y.294, V.295
- Ligands: ZN.5, NAD.7
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:T.45
ETF.12: 11 residues within 4Å:- Chain C: C.43, T.45, W.54, H.66, W.92, C.153, M.270, Y.294, V.295
- Ligands: ZN.9, NAD.11
No protein-ligand interaction detected (PLIP)ETF.16: 11 residues within 4Å:- Chain D: C.43, T.45, W.54, H.66, W.92, C.153, M.270, Y.294, V.295
- Ligands: ZN.13, NAD.15
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:H.66
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Guntupalli, S.R. et al., Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase. Biochemistry (2021)
- Release Date
- 2021-03-31
- Peptides
- ADH1 isoform 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 8 x ZN: ZINC ION(Non-covalent)
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x ETF: TRIFLUOROETHANOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Guntupalli, S.R. et al., Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase. Biochemistry (2021)
- Release Date
- 2021-03-31
- Peptides
- ADH1 isoform 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D