SMTL ID : 7kdf.1

Structure of Stu2 Bound to dwarf Ndc80c

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: E.184, D.185, N.186 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.185, A:N.186 SO4.2: 1 residues within 4Å: Chain A: R.10 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.10, A:H.106 Salt bridges: A:R.10 SO4.3: 3 residues within 4Å: Chain A: R.117, K.121 Chain B: Y.98 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.117, A:K.121 SO4.4: 2 residues within 4Å: Chain B: N.21, P.26 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.21 Water bridges: B:D.23, B:I.27 SO4.5: 2 residues within 4Å: Chain B: C.36, R.148 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.148 SO4.6: 2 residues within 4Å: Chain E: T.13, R.17 1 PLIP interactions: 1 interactions with chain E Salt bridges: E:R.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zahm, J.A. et al., Structural basis of Stu2 recruitment to yeast kinetochores. Elife (2021)

Release Date

2020-11-11

Peptides

NDC80 isoform 1,NDC80 isoform 1: A
NUF2 isoform 1,NUF2 isoform 1: B
Spc24: C
SPC25 isoform 1,SPC25 isoform 1: D
STU2: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

NDC80 isoform 1,NDC80 isoform 1

NUF2 isoform 1,NUF2 isoform 1

Spc24

SPC25 isoform 1,SPC25 isoform 1

STU2

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