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SMTL ID : 7kdm.2 (1 other biounit)

Ricin bound to VHH antibody V5G6

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.30 Å
Oligo State
hetero-1-1-1-mer
Ligands
1 x NAG- FUC: alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
5 x ZN: ZINC ION(Non-covalent)
2 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Rudolph, M.J. et al., Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface. J.Mol.Biol. (2021)
Release Date
2021-08-04
Peptides
Ricin chain A: A
Ricin chain B: B
Anti-RON nanobody: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
D
B
E
C
F

Ricin chain A

Ricin chain B

Anti-RON nanobody

Related Entries With Identical Sequence

1br5.1 | 1il3.1 | 1il4.1 | 1il5.1 | 1il5.2 | 1il9.1 | 2aai.1 | 3rti.1 | 3rtj.1 | 4esi.1 | 4huo.1 | 4huo.2 | 4hup.1 | 4hup.2 | 4hv7.1 | 4hv7.2 | 4kuc.1 | 4kuc.2 | 7kbi.1 | 7kbk.1 | 7kc9.1 | 7kc9.2 | 7kd0.1 | 7kd2.1 | 7kdm.1 | 7kdu.1 | 7tgf.1 | 7tgi.1 | 7th3.1