SMTL ID : 7kem.1 (1 other biounit)

Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

4 x 0JC: Di-mu-iodobis(ethylenediamine)diplatinum(II)(Non-covalent)

0JC.1: 2 residues within 4Å: Chain A: G.346, H.347 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.346 Metal complexes: A:H.347 0JC.2: 3 residues within 4Å: Chain A: M.157, A.171, R.173 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.173 0JC.3: 3 residues within 4Å: Chain A: H.150, E.235, M.237 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.150, A:H.150 0JC.4: 4 residues within 4Å: Chain A: E.213, H.214, F.215, I.291 No protein-ligand interaction detected (PLIP)

1 x DGL: D-GLUTAMIC ACID(Non-covalent)

DGL.5: 4 residues within 4Å: Chain A: Y.318, T.320, W.340, H.352 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.318, A:T.320 Hydrogen bonds: A:H.352

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Libreros, G.A. et al., Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis. To Be Published

Release Date

2020-11-18

Peptides

L,D-transpeptidase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

L,D-transpeptidase 2

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