SMTL ID : 7kfr.2 (4 other biounits)

Adeno-Associated Virus (AAV-DJ) - cryo-EM structure at 1.56 Angstrom Resolution

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: R.72, H.74, C.147, L.148, P.149, P.150 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.74, A:C.147 MG.2: 5 residues within 4Å: Chain A: Y.210, H.212, R.519, N.520, L.521 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.212 MG.3: 4 residues within 4Å: Chain A: H.312, E.317, D.347, E.349 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.312, A:E.317, A:D.347, A:D.347, A:E.349

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, Q. et al., Adeno-Associated Virus (AAV-DJ)-Cryo-EM Structure at 1.56 Angstroms Resolution. Viruses (2020)

Release Date

2020-12-16

Peptides

Capsid protein VP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Capsid protein VP1

Related Entries With Identical Sequence