SMTL ID : 7kfy.1

Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-F10 Fab)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: F.25, G.26, F.29, N.30, V.54, L.55 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.25, A:F.29, A:L.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clark, S.A. et al., Molecular basis for a germline-biased neutralizing antibody response to SARS-CoV-2. Biorxiv (2020)

Release Date

2020-12-02

Peptides

Spike glycoprotein: A
heavy chain of human antibody C1A-F10 Fab: B
light chain of human antibody C1A-F10 Fab: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Spike glycoprotein

heavy chain of human antibody C1A-F10 Fab

light chain of human antibody C1A-F10 Fab

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