SMTL ID : 7khx.1

Mouse GITR-GITRL complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.21 Å

Oligo State

hetero-2-2-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain B: F.112, G.114, N.115, T.117, H.118, N.119 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.33 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.33 NAG.3: 2 residues within 4Å: Chain B: N.21, Y.48 No protein-ligand interaction detected (PLIP) NAG.4: 3 residues within 4Å: Chain D: N.115, T.117, H.118 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:T.117 Hydrogen bonds: D:T.117, D:T.117, D:H.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., Structures of mouse and human GITR-GITRL complexes reveal unique TNF superfamily interactions. Nat Commun (2021)

Release Date

2021-03-03

Peptides

Tumor necrosis factor ligand superfamily member 18: AC
Tumor necrosis factor receptor superfamily member 18: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
A

B
D

D
C

Tumor necrosis factor ligand superfamily member 18

Tumor necrosis factor receptor superfamily member 18