SMTL ID : 7kjw.1

Structure of HIV-1 reverse transcriptase initiation complex core with efavirenz

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.445, D.551 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.445

1 x EFZ: (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE(Non-covalent)

EFZ.2: 13 residues within 4Å: Chain A: L.102, K.103, K.105, V.108, V.181, Y.183, Y.190, G.192, F.229, W.231, L.236, H.237, Y.320 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.102, A:L.102, A:K.105, A:V.108, A:Y.183, A:Y.190, A:W.231, A:L.236, A:Y.320 Hydrogen bonds: A:K.103, A:K.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ha, B. et al., High-resolution view of HIV-1 reverse transcriptase initiation complexes and inhibition by NNRTI drugs. Nat Commun (2021)

Release Date

2021-03-17

Peptides

Reverse transcriptase/ribonuclease H: A
reverse transcriptase p51 subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

reverse transcriptase p51 subunit

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