SMTL ID : 7kjx.1

Structure of HIV-1 reverse transcriptase initiation complex core with nevirapine

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.445, D.500, D.551 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.445, A:D.551

1 x NVP: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE(Non-covalent)

NVP.2: 15 residues within 4Å: Chain A: P.97, L.102, K.103, K.105, V.108, V.181, Y.183, Y.190, G.192, F.229, W.231, L.236, H.237, P.238, Y.320 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.97, A:Y.183, A:Y.190, A:W.231, A:L.236, A:Y.320

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ha, B. et al., High-resolution view of HIV-1 reverse transcriptase initiation complexes and inhibition by NNRTI drugs. Nat Commun (2021)

Release Date

2021-03-17

Peptides

Reverse transcriptase/ribonuclease H: A
reverse transcriptase p51 subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

reverse transcriptase p51 subunit

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