SMTL ID : 7kkw.1

Neutron structure of Reduced Human MnSOD

Coordinates

PDB Format Compare

Method

NEUTRON DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 7 residues within 4Å: Chain A: H.27, H.75, W.124, D.160, W.162, H.164 Ligands: D8U.3 7 PLIP interactions: 3 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.27, A:D.160, A:H.164, H2O.1, H2O.1, H2O.1, H2O.1 MN.4: 6 residues within 4Å: Chain B: H.27, H.75, W.124, D.160, W.162, H.164 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.27, B:H.75, B:D.160, B:H.164, H2O.3, H2O.3 MN.7: 7 residues within 4Å: Chain C: H.27, H.75, W.124, D.160, W.162, H.164 Ligands: D8U.9 7 PLIP interactions: 3 interactions with chain C, 4 Ligand-Water interactions Metal complexes: C:H.27, C:D.160, C:H.164, H2O.6, H2O.6, H2O.6, H2O.6 MN.10: 6 residues within 4Å: Chain D: H.27, H.75, W.124, D.160, W.162, H.164 6 PLIP interactions: 4 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.27, D:H.75, D:D.160, D:H.164, H2O.8, H2O.8

8 x D8U: deuterium(1+)(Non-covalent)

D8U.2: 5 residues within 4Å: Chain A: L.26, H.31, H.164 Chain C: Y.167, N.172 Protein-ligand interaction information (PLIP) not available D8U.3: 7 residues within 4Å: Chain A: Y.35, H.75, W.124, Q.144, W.162, H.164 Ligands: MN.1 Protein-ligand interaction information (PLIP) not available D8U.5: 5 residues within 4Å: Chain B: L.26, H.31, H.164 Chain D: Y.167, N.172 Protein-ligand interaction information (PLIP) not available D8U.6: 6 residues within 4Å: Chain B: H.31, Y.35, F.67, Q.144, W.162, H.164 Protein-ligand interaction information (PLIP) not available D8U.8: 5 residues within 4Å: Chain A: Y.167, N.172 Chain C: L.26, H.31, H.164 Protein-ligand interaction information (PLIP) not available D8U.9: 7 residues within 4Å: Chain C: Y.35, H.75, W.124, Q.144, W.162, H.164 Ligands: MN.7 Protein-ligand interaction information (PLIP) not available D8U.11: 5 residues within 4Å: Chain B: Y.167, N.172 Chain D: L.26, H.31, H.164 Protein-ligand interaction information (PLIP) not available D8U.12: 6 residues within 4Å: Chain D: H.31, Y.35, F.67, Q.144, W.162, H.164 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Azadmanesh, J. et al., Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase. Nat Commun (2021)

Release Date

2021-04-21

Peptides

Superoxide dismutase [Mn], mitochondrial: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Superoxide dismutase [Mn], mitochondrial

Related Entries With Identical Sequence