SMTL ID : 7kkz.1

Crystal structure of mouse anti-HIV potent neutralizing antibody M4H2K1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)

NHE.1: 7 residues within 4Å: Chain A: V.98, P.99 Chain B: W.47, T.60, H.61, Y.62, K.67 7 PLIP interactions: 2 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:V.98, A:P.99, B:W.47, B:H.61 Hydrogen bonds: B:H.61, B:Y.62 Salt bridges: B:K.67

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain B: K.19, Y.82 1 PLIP interactions: 1 interactions with chain B Water bridges: B:K.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, S. et al., Neutralizing Antibodies Induced by First-Generation gp41-Stabilized HIV-1 Envelope Trimers and Nanoparticles. Mbio (2021)

Release Date

2021-07-07

Peptides

Light chain of Fab fragment of mouse monoclonal antibody M4H2K1: A
Heavy chain of Fab fragment of mouse monoclonal antibody M4H2K1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

Light chain of Fab fragment of mouse monoclonal antibody M4H2K1

Heavy chain of Fab fragment of mouse monoclonal antibody M4H2K1

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