SMTL ID : 7kmu.1

Structure of WT Malaysian Banana Lectin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: S.28, V.29, K.30, E.41, I.42, T.43, T.52, E.64 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.28, A:E.41, A:T.43, A:E.64 EDO.2: 6 residues within 4Å: Chain A: G.15, L.86, G.129, S.130, F.131, D.133 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.15, A:G.129, A:S.130, A:F.131, A:F.131 EDO.3: 7 residues within 4Å: Chain B: G.14, G.15, L.86, G.129, S.130, F.131, D.133 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.15, B:G.129, B:S.130, B:F.131, B:F.131 EDO.4: 8 residues within 4Å: Chain B: S.28, V.29, K.30, E.41, I.42, T.43, T.52, E.64 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.28, B:E.41, B:T.43, B:E.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coves-Datson, E.M. et al., Targeted disruption of pi-pi stacking in Malaysian banana lectin reduces mitogenicity while preserving antiviral activity. Sci Rep (2021)

Release Date

2021-01-27

Peptides

Jacalin-type lectin domain-containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Jacalin-type lectin domain-containing protein