SMTL ID : 7kmw.1 (3 other biounits)

Crystal structure of IspD from Mycobacterium paratuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: P.143, A.145, R.149, D.236 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.146, A:R.149, A:R.149 EDO.2: 3 residues within 4Å: Chain A: T.217, S.221, H.225 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.221, A:H.225 EDO.3: 6 residues within 4Å: Chain A: P.166, L.167, R.186, D.187, L.189, R.190 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:L.167, A:R.186, A:R.186, A:D.187, A:L.189, A:R.190 EDO.4: 4 residues within 4Å: Chain A: A.145, A.148, R.149, Q.152 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.148 Water bridges: A:R.149, A:R.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pierce, P.G. et al., Crystal structure of IspD from Mycobacterium paratuberculosis. To Be Published

Release Date

2020-11-11

Peptides

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

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