SMTL ID : 7knx.4 (3 other biounits)

Crystal structure of SND1 in complex with C-26-A6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: R.60, N.63, R.66, R.135 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.60, A:R.60, A:N.63, A:R.66, A:R.135

1 x QOV: 5-chloro-2-methoxy-N-(2-methyl[1,2,4]triazolo[1,5-a]pyridin-8-yl)benzene-1-sulfonamide(Non-covalent)

QOV.2: 10 residues within 4Å: Chain A: F.245, R.249, L.250, H.273, N.275, G.276, N.277, I.278, L.281, E.285 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.245, A:R.249, A:L.250, A:N.275, A:E.285 Hydrogen bonds: A:R.249, A:R.249, A:N.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shen, M. et al., Small-molecule inhibitors that disrupt the MTDH-SND1 complex suppress breast cancer progression and metastasis. Nat Cancer (2022)

Release Date

2021-12-08

Peptides

Staphylococcal nuclease domain-containing protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Staphylococcal nuclease domain-containing protein 1

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