SMTL ID : 7kp5.1

Energetic and structural effects of the Tanford transition on the ligand recognition of bovine Beta-lactoglobulin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

3 x SDS: DODECYL SULFATE(Non-covalent)

SDS.1: 10 residues within 4Å: Chain A: L.46, I.84, A.86, L.87, N.88, E.89, V.92, L.103, F.105, M.107 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.46, A:I.84, A:V.92, A:L.103, A:F.105, A:F.105, A:F.105 Hydrogen bonds: A:L.87, A:N.88, A:E.89 SDS.2: 18 residues within 4Å: Chain B: P.38, L.39, V.43, L.46, L.54, I.56, L.58, I.71, F.82, I.84, A.86, L.87, N.88, E.89, V.92, V.94, F.105, M.107 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:V.43, B:L.46, B:L.54, B:I.56, B:L.58, B:I.71, B:F.82, B:I.84, B:V.92, B:V.94, B:F.105, B:F.105 Hydrogen bonds: B:L.87, B:N.88, B:N.88, B:E.89 SDS.3: 9 residues within 4Å: Chain A: I.29, S.30, D.33, A.34 Chain B: Q.35, R.40, F.151, Q.155, H.161 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:I.29, B:F.151 Hydrogen bonds: A:D.33, A:A.34, B:Q.35, B:R.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Labra-Nunez, A. et al., Energetic and structural effects of the Tanford transition on ligand recognition of bovine beta-lactoglobulin. Arch.Biochem.Biophys. (2021)

Release Date

2021-01-27

Peptides

Beta-lactoglobulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AA1

B
BA1

Beta-lactoglobulin

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