SMTL ID : 7kpm.1

Crystal structure of hEphB1 bound with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: I.15, G.16, A.17, G.18, E.19, F.20, G.21, V.23, A.39, K.41, E.58, T.87, E.88, F.89, M.90, L.141 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:F.20, A:G.21, A:E.58, A:T.87, A:E.88, A:M.90 Water bridges: A:E.19, A:E.19, A:K.41, A:A.94, A:R.138, A:S.151 Salt bridges: A:K.41, A:K.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahmed, M.S. et al., Identification of tetracycline combinations as EphB1 tyrosine kinase inhibitors for treatment of neuropathic pain. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-03-10

Peptides

Ephrin type-B receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ephrin type-B receptor 1

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