SMTL ID : 7ktf.1

DNA Polymerase Mu, 8-oxodGTP:Ct Product State Ternary Complex, 50 mM Mg2+ (180min)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.49 Å
Oligo State
monomer
Ligands
1 x DC- DG- DG- DC- DC- DT- DA- DC- DG: DNA (5'-D(*CP*GP*GP*CP*CP*TP*AP*CP*G)-3')(Non-covalent)
1 x DC- DG- DT- DA- 8OG: DNA (5'-D(*CP*GP*TP*AP*(8OG))-3')(Non-covalent)
1 x DG- DC- DC- DG: DNA (5'-D(P*GP*CP*CP*G)-3')(Non-covalent)
2 x MG: MAGNESIUM ION(Non-covalent)
1 x NA: SODIUM ION(Non-functional Binders)
1 x PPV: PYROPHOSPHATE(Non-covalent)
10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Jamsen, J.A. et al., Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide. Nat Commun (2021)
Release Date
2021-12-15
Peptides
DNA-directed DNA/RNA polymerase mu: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A