SMTL ID : 7ku6.2 (1 other biounit)

Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56N mutant with pyruvate bound in the active site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.81 Å

Oligo State

homo-tetramer

Ligands

4 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 6 residues within 4Å: Chain A: Q.128, Q.129, Y.132, D.162, T.163, K.166 No protein-ligand interaction detected (PLIP) PGE.2: 6 residues within 4Å: Chain B: Q.128, Q.129, Y.132, T.163, K.166 Ligands: MG.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.166 PGE.4: 6 residues within 4Å: Chain C: Q.128, Q.129, Y.132, D.162, T.163, K.166 No protein-ligand interaction detected (PLIP) PGE.5: 6 residues within 4Å: Chain D: Q.128, Q.129, Y.132, T.163, K.166 Ligands: MG.6 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:K.166

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 2 residues within 4Å: Chain B: D.170 Ligands: PGE.2 No protein-ligand interaction detected (PLIP) MG.6: 2 residues within 4Å: Chain D: D.170 Ligands: PGE.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saran, S. et al., ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS. To Be Published

Release Date

2021-12-01

Peptides

4-hydroxy-tetrahydrodipicolinate synthase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
E

D
F

4-hydroxy-tetrahydrodipicolinate synthase

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