SMTL ID : 7kxl.1

BTK1 SOAKED WITH COMPOUND 5, Y551 IS SEQUESTERED

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

monomer

Ligands

1 x X9J: 3-tert-butyl-N-({2-fluoro-4-[2-(1-methyl-1H-pyrazol-4-yl)-1H-imidazo[4,5-b]pyridin-7-yl]phenyl}methyl)-1,2,4-oxadiazole-5-carboxamide(Non-covalent)

X9J.1: 21 residues within 4Å: Chain A: L.17, G.18, T.19, G.20, Q.21, F.22, V.25, A.37, K.39, E.84, Y.85, M.86, A.87, G.89, D.130, N.135, L.137, D.148, L.151, S.152, Y.160 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.17, A:Q.21, A:V.25, A:V.25, A:A.37, A:L.137, A:L.151 Hydrogen bonds: A:M.86 Water bridges: A:F.22, A:C.90

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 2 residues within 4Å: Chain A: T.12, F.13 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.13 DMS.3: 6 residues within 4Å: Chain A: R.129, P.169, W.172, S.173, F.183, S.187 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.188 Water bridges: A:R.129, A:R.129 DMS.4: 5 residues within 4Å: Chain A: Y.85, M.86, A.87, N.139, D.140 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.87, A:D.140 Salt bridges: A:D.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qiu, H. et al., Discovery of potent and selective reversible Bruton's tyrosine kinase inhibitors. Bioorg.Med.Chem. (2021)

Release Date

2021-05-19

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase BTK

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