SMTL ID : 7l0f.2 (3 other biounits)

Monobody 12VC3 Bound to HRAS(WT)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.18, T.36, D.58 Ligands: GSP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.18, A:T.36, H2O.2, H2O.2

1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)

GSP.2: 27 residues within 4Å: Chain A: G.13, G.14, V.15, G.16, K.17, S.18, A.19, F.29, V.30, D.31, E.32, Y.33, P.35, T.36, A.60, G.61, N.117, K.118, D.120, L.121, S.146, A.147, K.148 Chain B: V.45, G.46, F.48 Ligands: MG.1 26 PLIP interactions: 24 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:A.12, A:G.14, A:V.15, A:G.16, A:K.17, A:K.17, A:S.18, A:A.19, A:V.30, A:T.36, A:G.61, A:N.117, A:K.118, A:K.118, A:A.147, A:K.148, B:V.45 Water bridges: A:S.18, A:S.18, A:D.34, B:G.46 Salt bridges: A:K.17, A:D.120 pi-Stacking: A:F.29, A:F.29 pi-Cation interactions: A:K.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teng, K.W. et al., Selective and noncovalent targeting of RAS mutants for inhibition and degradation. Nat Commun (2021)

Release Date

2021-03-24

Peptides

GTPase HRas: A
Monobody 12VC3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

GTPase HRas

Monobody 12VC3

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