SMTL ID : 7l37.1

T4 Lysozyme L99A - Apo - RT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 8 residues within 4Å: Chain A: E.11, D.20, T.26, G.30, L.32, F.104, Q.105 Ligands: BME.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.11, A:L.32, A:Q.105, A:R.145 Water bridges: A:Y.18, A:Y.18, A:D.20, A:D.20

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: T.142, P.143, N.144, R.145 Ligand excluded by PLIP

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 3 residues within 4Å: Chain A: F.4, N.68, D.72 No protein-ligand interaction detected (PLIP) BME.4: 6 residues within 4Å: Chain A: G.30, H.31, L.32, D.70, F.104 Ligands: TRS.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.32 Water bridges: A:H.31, A:H.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradford, S.Y.C. et al., Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci (2021)

Release Date

2021-10-27

Peptides

Endolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endolysin

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