SMTL ID : 7l59.1

Crystal structure of the dark-adapted full-length bacteriophytochrome XccBphP-G454E variant from Xanthomonas campestris in the Pfr state

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

monomer

Ligands

1 x BLA: BILIVERDINE IX ALPHA(Covalent)

BLA.1: 23 residues within 4Å: Chain A: C.19, A.20, Y.174, Y.196, L.199, Y.201, S.204, D.205, I.206, P.207, A.210, Y.214, R.220, V.254, S.255, H.258, Y.261, V.272, S.286, H.288, L.475, P.477, S.480 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:Y.174, A:Y.196, A:D.205, A:I.206, A:I.206, A:I.206, A:A.210, A:H.258, A:Y.261, A:V.272, A:P.477 Hydrogen bonds: A:D.205, A:D.205, A:Y.214, A:Y.214, A:H.258, A:Y.261, A:S.286, A:S.480 Water bridges: A:D.205, A:R.252, A:R.252, A:S.255 Salt bridges: A:R.220, A:H.258, A:H.288 pi-Stacking: A:Y.261

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Otero, L.H. et al., Structural basis for the Pr-Pfr long-range signaling mechanism of a full-length bacterial phytochrome at the atomic level. Sci Adv (2021)

Release Date

2021-12-29

Peptides

Bacteriophytochrome: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bacteriophytochrome