SMTL ID : 7l67.1

C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with Fuc-(alpha1-3)-GlcNAc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x NAG- FUC: alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-FUC.1: 9 residues within 4Å: Chain A: Y.97, E.99, N.101, Y.103, E.107, N.121, D.122, I.123 Ligands: CA.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.99, A:N.101, A:E.107, A:N.121, A:N.101 Water bridges: A:E.111

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: E.99, N.101, E.107, N.121, D.122 Ligands: NAG-FUC.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.99, A:E.107, A:D.122, A:D.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Feinberg, H. et al., Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206. J.Biol.Chem. (2021)

Release Date

2021-02-03

Peptides

Macrophage mannose receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrophage mannose receptor 1

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