SMTL ID : 7l6r.1

Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and Manganese (Mn).

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.98 Å
Oligo State
hetero-1-1-mer
Ligands
1 x M7G- A2M- U- U- A- A: RNA (5'-D(*(M7G))-R(P*(A2M)P*UP*UP*AP*A)-3')(Non-covalent)
1 x MN: MANGANESE (II) ION(Non-covalent)
2 x CL: CHLORIDE ION(Non-functional Binders)
1 x SO4: SULFATE ION(Non-functional Binders)
1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
4 x GLC: alpha-D-glucopyranose(Non-covalent)
1 x ZN: ZINC ION(Non-covalent)
1 x BDF: beta-D-fructopyranose(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Minasov, G. et al., Mn 2+ coordinates Cap-0-RNA to align substrates for efficient 2'- O -methyl transfer by SARS-CoV-2 nsp16. Sci.Signal. (2021)
Release Date
2021-01-06
Peptides
2'-O-methyltransferase: A
Non-structural protein 10: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

2'-O-methyltransferase

Non-structural protein 10

Related Entries With Identical Sequence

7jyy.1 | 7jyy.2 | 7jz0.1 | 7jz0.2 | 7l6t.1 | 7ult.1 | 7ult.2